Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A2J6PDD4 | A0A2J6PFC5 | Transcription elongation factor Spt5. | Putative DNA-directed RNA polymerases I, II, and III subunit RPABC5. | 0.984 |
A0A2J6PDD4 | A0A2J6PH02 | Transcription elongation factor Spt5. | Uncharacterized protein. | 0.734 |
A0A2J6PDD4 | A0A2J6PKM0 | Transcription elongation factor Spt5. | Metallothionein-I gene transcription activator. | 0.992 |
A0A2J6PDD4 | A0A2J6PVW9 | Transcription elongation factor Spt5. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.989 |
A0A2J6PDD4 | A0A2J6Q8W3 | Transcription elongation factor Spt5. | Insert subdomain of RNA polymerase alpha subunit. | 0.995 |
A0A2J6PDD4 | A0A2J6QB01 | Transcription elongation factor Spt5. | RPB5 subunit of DNA-directed RNA polymerase. | 0.995 |
A0A2J6PDD4 | A0A2J6QBT4 | Transcription elongation factor Spt5. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
A0A2J6PDD4 | A0A2J6QCV7 | Transcription elongation factor Spt5. | RNA polymerase Rpb6. | 0.994 |
A0A2J6PFC5 | A0A2J6PDD4 | Putative DNA-directed RNA polymerases I, II, and III subunit RPABC5. | Transcription elongation factor Spt5. | 0.984 |
A0A2J6PFC5 | A0A2J6PH02 | Putative DNA-directed RNA polymerases I, II, and III subunit RPABC5. | Uncharacterized protein. | 0.723 |
A0A2J6PFC5 | A0A2J6PKM0 | Putative DNA-directed RNA polymerases I, II, and III subunit RPABC5. | Metallothionein-I gene transcription activator. | 0.999 |
A0A2J6PFC5 | A0A2J6PUA6 | Putative DNA-directed RNA polymerases I, II, and III subunit RPABC5. | PHD domain-containing protein. | 0.985 |
A0A2J6PFC5 | A0A2J6PVW9 | Putative DNA-directed RNA polymerases I, II, and III subunit RPABC5. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
A0A2J6PFC5 | A0A2J6Q8W3 | Putative DNA-directed RNA polymerases I, II, and III subunit RPABC5. | Insert subdomain of RNA polymerase alpha subunit. | 0.999 |
A0A2J6PFC5 | A0A2J6QB01 | Putative DNA-directed RNA polymerases I, II, and III subunit RPABC5. | RPB5 subunit of DNA-directed RNA polymerase. | 0.999 |
A0A2J6PFC5 | A0A2J6QBT4 | Putative DNA-directed RNA polymerases I, II, and III subunit RPABC5. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
A0A2J6PFC5 | A0A2J6QCV7 | Putative DNA-directed RNA polymerases I, II, and III subunit RPABC5. | RNA polymerase Rpb6. | 0.999 |
A0A2J6PH02 | A0A2J6PDD4 | Uncharacterized protein. | Transcription elongation factor Spt5. | 0.734 |
A0A2J6PH02 | A0A2J6PFC5 | Uncharacterized protein. | Putative DNA-directed RNA polymerases I, II, and III subunit RPABC5. | 0.723 |
A0A2J6PH02 | A0A2J6PKM0 | Uncharacterized protein. | Metallothionein-I gene transcription activator. | 0.723 |
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