STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PH88Acid protease; Belongs to the peptidase A1 family. (561 aa)    
Predicted Functional Partners:
A0A2J6Q693
Cysteine proteinase; Belongs to the peptidase C1 family.
   
 0.643
A0A2J6QJD9
SERPIN domain-containing protein; Belongs to the serpin family.
    
 0.507
A0A2J6QB27
Reticulon-like protein.
    
  0.505
A0A2J6PZT4
LuxS/MPP-like metallohydrolase.
     
 0.436
A0A2J6Q3Z3
P/Homo B domain-containing protein.
    
 0.431
A0A2J6QMJ5
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.414
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.