STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PJ45Fe2OG dioxygenase domain-containing protein. (681 aa)    
Predicted Functional Partners:
A0A2J6PN18
Putative elongation factor 3.
   
 
 0.991
A0A2J6QP09
Uncharacterized protein.
   
 
 0.924
A0A2J6PTK9
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
   0.865
A0A2J6QJS5
Coproporphyrinogen iii oxidase-like protein.
   
  
 0.673
A0A2J6Q8T5
Putative ribosome biogenesis protein tsr1 like protein.
   
    0.654
A0A2J6QI16
N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
 
 0.651
A0A2J6QLZ1
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.620
A0A2J6PN96
DUF663-domain-containing protein.
   
    0.605
A0A2J6QDA9
Uncharacterized protein.
   
   0.602
A0A2J6QNA6
Tr-type G domain-containing protein.
   
 
 0.596
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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