STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PJU5Uncharacterized protein. (627 aa)    
Predicted Functional Partners:
A0A2J6QMV5
2-methylcitrate dehydratase.
 
   
  0.700
A0A2J6PXY4
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.586
A0A2J6Q8T5
Putative ribosome biogenesis protein tsr1 like protein.
   
  0.575
A0A2J6QHN2
rRNA processing protein-like protein Bystin.
   
  0.574
A0A2J6PMA7
C-8 sterol isomerase.
   
 0.567
A0A2J6Q868
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.554
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
  0.553
A0A2J6Q222
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.553
A0A2J6PRU8
40S ribosomal protein S27.
    
  0.551
A0A2J6QKN2
Putative 40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
  0.549
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.