STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PKN8Putative ATP-binding cassette transporter. (1445 aa)    
Predicted Functional Partners:
A0A2J6PEF5
Ubiquitin carboxyl-terminal hydrolase.
    
  0.640
A0A2J6PM97
Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.
    
  0.582
A0A2J6Q6N6
Putative cell division control protein 48; Belongs to the AAA ATPase family.
    
 0.579
A0A2J6QHH7
Putative ATPase family gene 2 protein.
    
 0.579
A0A2J6QBU5
Ras GEF.
    
  0.573
A0A2J6QNZ8
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.567
A0A2J6QEM5
ANTH-domain-containing protein.
    
 0.530
A0A2J6QQ91
Cysteine proteinase.
    
  0.513
A0A2J6QKP5
WD40 repeat-like protein.
    
  0.512
A0A2J6PI26
Cytoplasmic dynein-like protein 1 heavy chain 1.
    
 0.500
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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