STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PM50Alpha/beta-hydrolase. (256 aa)    
Predicted Functional Partners:
A0A2J6Q315
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
  
 0.631
A0A2J6PQ24
Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
    
 0.574
A0A2J6PQ39
Uncharacterized protein.
    
 0.574
A0A2J6QPZ4
60S ribosomal protein L25.
   
    0.569
A0A2J6Q314
Initiation factor 2.
  
  
 0.566
A0A2J6QAB4
Tr-type G domain-containing protein.
  
  
 0.566
A0A2J6PU20
Ribosomal protein L2.
   
   0.557
A0A2J6QPS2
60S ribosomal protein L2.
   
   0.543
A0A2J6Q766
Nucleic acid-binding protein.
  
  
 0.531
A0A2J6PD31
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.526
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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