STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PM9026S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (467 aa)    
Predicted Functional Partners:
A0A2J6PET4
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.999
A0A2J6PGU0
Proteasome subunit beta.
   
 0.999
A0A2J6PHY6
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.999
A0A2J6PIU8
26S protease regulatory subunit 8; Belongs to the AAA ATPase family.
  
0.999
A0A2J6PIZ9
26S proteasome subunit P45; Belongs to the AAA ATPase family.
  
0.999
A0A2J6PRP1
PCI domain-containing protein.
   
 0.999
A0A2J6PS75
PCI domain-containing protein.
   
 0.999
A0A2J6PU34
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
  
0.999
A0A2J6QF24
26S proteasome subunit P45; Belongs to the AAA ATPase family.
  
0.999
A0A2J6QIY3
PCI-domain-containing protein.
   
 0.999
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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