STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PMW9BTB domain-containing protein. (233 aa)    
Predicted Functional Partners:
A0A2J6PPZ4
Uncharacterized protein.
   
 
 0.780
A0A2J6PZR4
MRP-L46 domain-containing protein.
   
 
 0.778
A0A2J6QC37
Translation protein.
   
 
 0.777
A0A2J6QNE6
39S ribosomal protein-like protein L33.
   
 
 0.774
A0A2J6Q5W5
Mitochondrial ribosomal protein-like protein.
   
 
 0.771
A0A2J6Q6I8
Mitochondrial ribosomal protein-like protein subunit L51.
   
   0.771
A0A2J6PTQ6
50S ribosomal protein-like protein L4.
   
 
 0.768
A0A2J6QGK3
Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.765
A0A2J6QA10
MRP-L47-domain-containing protein.
   
 
 0.764
A0A2J6Q793
Ribosomal protein L15.
   
   0.759
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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