STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PP47Alpha/beta-hydrolase. (396 aa)    
Predicted Functional Partners:
A0A2J6PRQ0
Glycoside hydrolase family 28 protein.
   
 0.747
A0A2J6QNE7
WH1-domain-containing protein.
   
 0.747
A0A2J6PTU9
WH2 domain-containing protein.
    
 
 0.662
A0A2J6QF82
Pkinase-domain-containing protein.
    
 0.628
A0A2J6PRA5
PAXNEB-domain-containing protein.
    
 
 0.569
A0A2J6QM30
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
    
 
 0.564
A0A2J6PM61
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
    
 
 0.562
A0A2J6PN18
Putative elongation factor 3.
    
 
 0.555
A0A2J6QP09
Uncharacterized protein.
    
 
 0.555
A0A2J6QC06
FCH-domain-containing protein.
   
 
 0.553
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.