STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PPK3Uncharacterized protein. (568 aa)    
Predicted Functional Partners:
A0A2J6QMD2
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
  0.835
A0A2J6QAB0
Rhodanese-like protein.
   
 
 0.788
A0A2J6Q793
Ribosomal protein L15.
   
 
 0.786
A0A2J6QC37
Translation protein.
   
 
 0.779
A0A2J6QQ43
50S ribosomal protein l13.
  
 
 0.779
A0A2J6QA10
MRP-L47-domain-containing protein.
   
   0.776
A0A2J6PZR4
MRP-L46 domain-containing protein.
   
 
 0.772
A0A2J6PRI4
Nucleic acid-binding protein.
   
 
 0.762
A0A2J6QGU2
Ribosomal protein S18.
   
 
 0.760
A0A2J6Q032
Uncharacterized protein.
   
 
 0.752
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.