STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PU99DUF1903-domain-containing protein. (80 aa)    
Predicted Functional Partners:
A0A2J6PJ74
Histone H2B; Belongs to the histone H2B family.
   
 0.995
A0A2J6PXY4
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.989
A0A2J6PUR6
Histone H2A; Belongs to the histone H2A family.
   
 0.969
A0A2J6PLG2
Histone H3.
   
 0.953
A0A2J6QML5
Histone H3; Belongs to the histone H3 family.
   
 0.953
A0A2J6QBT4
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.949
A0A2J6Q8W3
Insert subdomain of RNA polymerase alpha subunit.
    
 0.948
A0A2J6PEL2
BRCT domain-containing protein.
    
 0.946
A0A2J6QB01
RPB5 subunit of DNA-directed RNA polymerase.
    
  0.946
A0A2J6PKM0
Metallothionein-I gene transcription activator.
    
  0.944
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.