STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PVB2Galactose oxidase. (690 aa)    
Predicted Functional Partners:
A0A2J6PVA6
WLM-domain-containing protein.
 
      0.771
A0A2J6PVB7
RNA methylase family protein-like protein.
 
 
    0.666
A0A2J6PUA2
CBF-domain-containing protein.
   
    0.528
A0A2J6PIX2
Uncharacterized protein.
   
    0.517
A0A2J6QFM5
KH domain-containing protein.
    
   0.497
A0A2J6PUE2
NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
    0.491
A0A2J6Q5P0
Periodic tryptophan protein-like protein 2.
   
    0.461
A0A2J6PQ99
Uncharacterized protein.
   
    0.453
A0A2J6Q706
Uncharacterized protein.
   
    0.446
A0A2J6Q721
Glutamate-rich WD repeat-containing protein-like protein 1.
   
    0.446
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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