STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PWN8Glycoside hydrolase family 55 protein. (1019 aa)    
Predicted Functional Partners:
A0A2J6QM87
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.549
A0A2J6Q9U0
Nuclear transport factor 2.
    
 0.547
A0A2J6QFW8
Endoplasmic reticulum and nuclear membrane proteinc.
    
 0.540
A0A2J6PHS7
Replication protein A, subunit RPA32.
    
  0.536
A0A2J6QET4
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.526
A0A2J6QND5
MUS38-like protein.
    
 0.503
A0A2J6Q3Y0
Uncharacterized protein.
   
 0.495
A0A2J6QFF1
Putative Deoxyuridine 5'-triphosphate nucleotidohydrolase.
   
 0.495
A0A2J6QJN5
CBFD_NFYB_HMF domain-containing protein.
   
 0.495
A0A2J6QJR7
Uncharacterized protein.
   
 0.495
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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