STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PXV0FAD dependent oxidoreductase. (356 aa)    
Predicted Functional Partners:
A0A2J6QBI0
Alanine--glyoxylate aminotransferas-like protein.
  
 
 0.848
A0A2J6PIY6
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.815
A0A2J6QM76
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.815
A0A2J6Q0K6
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.798
A0A2J6QDJ0
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
    
 0.795
A0A2J6Q8A9
Tryptophan synthase.
    
  0.732
A0A2J6QNG9
Malate synthase; Belongs to the malate synthase family.
   
 
 0.727
A0A2J6Q9U3
FAD dependent oxidoreductase.
   
 
 0.725
A0A2J6QLB0
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
 
 0.715
A0A2J6PKQ2
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
 
 0.712
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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