STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PYK0CPSF_A domain-containing protein. (1143 aa)    
Predicted Functional Partners:
A0A2J6PEU5
Cullin-domain-containing protein; Belongs to the cullin family.
  
 0.998
A0A2J6Q7C4
WD40 repeat-like protein.
    
 0.997
A0A2J6QGB9
WD40 repeat-like protein.
    
 0.997
A0A2J6QQ09
RING-box protein 1.
    
 0.997
A0A2J6PRD9
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
    
 0.993
A0A2J6PRJ3
Uncharacterized protein.
    
 0.978
A0A2J6PIN9
Uncharacterized protein.
    
 0.976
A0A2J6PK25
WD40 repeat-like protein.
    
 0.976
A0A2J6Q1U8
26S proteasome subunit RPN7.
    
 0.968
A0A2J6PL99
Putative DNA repair and recombination protein RAD26.
    
 0.952
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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