STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PYM7Arginase/deacetylase. (1194 aa)    
Predicted Functional Partners:
A0A2J6PJ04
BRRG2, response regulator.
    
 0.964
A0A2J6Q5E9
WD40 repeat-like protein.
   
 0.929
A0A2J6PJ74
Histone H2B; Belongs to the histone H2B family.
    
 0.899
A0A2J6QIX6
Uncharacterized protein.
    
 0.895
A0A2J6PYK7
Uncharacterized protein.
      0.881
A0A2J6QC10
MRG-domain-containing protein.
    
 0.865
A0A2J6QF16
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.854
A0A2J6PXY4
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.834
A0A2J6PXX4
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.830
A0A2J6Q3M2
Histone deacetylase-like protein RpdA/Rpd3.
    
 0.830
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.