STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6Q0N1Uncharacterized protein. (1360 aa)    
Predicted Functional Partners:
A0A2J6Q8U2
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.676
A0A2J6PQ30
DNA repair protein rad18.
   
 0.674
A0A2J6QHK1
Actin-like ATPase domain-containing protein; Belongs to the actin family.
    
 0.671
A0A2J6QNZ8
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.665
A0A2J6PQX1
Actin/actin-like protein; Belongs to the actin family.
   
 0.659
A0A2J6Q9C9
Ubiquitin-conjugating enzyme.
    
 0.655
A0A2J6QHN1
YL1_C domain-containing protein.
    
 0.639
A0A2J6QCV7
RNA polymerase Rpb6.
    
 0.632
A0A2J6QDC3
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.622
A0A2J6Q1V2
Uncharacterized protein.
  
0.611
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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