STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6Q5G5Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. (347 aa)    
Predicted Functional Partners:
A0A2J6QLR5
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 0.967
A0A2J6PEZ6
Farnesyl-diphosphate farnesyltransferase.
  
 0.947
A0A2J6QHC3
Uncharacterized protein.
  
 0.941
A0A2J6PHW0
Isopentenyldiphosphate isomerase.
 
 
 0.929
A0A2J6QBJ2
Terpenoid synthase; Belongs to the FPP/GGPP synthase family.
    
 0.922
A0A2J6PYU2
Decaprenyl-diphosphate synthase-like protein subunit 1; Belongs to the FPP/GGPP synthase family.
    
 0.921
A0A2J6Q8A9
Tryptophan synthase.
    
 0.912
A0A2J6Q6U5
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.909
A0A2J6PDB8
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.906
A0A2J6QIH2
Protein farnesyltransferase.
     
 0.894
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.