STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6Q6N3Uncharacterized protein. (269 aa)    
Predicted Functional Partners:
A0A2J6PTS6
YjeF N-terminal domain-like protein.
  
 0.983
A0A2J6PM79
PH domain-like protein.
    
 0.977
A0A2J6Q5H5
Uncharacterized protein.
   
 0.965
A0A2J6PYJ5
PAT1 domain-containing protein.
    
 0.962
A0A2J6Q7R3
PAT1 domain-containing protein.
    
 0.962
A0A2J6PIZ4
DEAD-domain-containing protein; Belongs to the DEAD box helicase family.
    
 0.953
A0A2J6PIP5
Uncharacterized protein.
    
 
 0.936
A0A2J6Q9T8
Sure-like protein.
    
 
 0.919
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.910
A0A2J6PJQ4
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
  
 0.881
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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