STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6Q728RING-type domain-containing protein. (540 aa)    
Predicted Functional Partners:
A0A2J6QJH9
PRKCSH domain-containing protein.
    
 0.738
A0A2J6QL13
Uncharacterized protein.
    
 0.738
A0A2J6QDN7
UV excision repair protein Rad23.
    
 0.714
A0A2J6PDK7
Uncharacterized protein.
    
 0.690
A0A2J6PGA4
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.690
A0A2J6QP90
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.690
A0A2J6PRK6
HCP-like protein.
    
 0.640
A0A2J6Q410
HCP-like protein.
    
 0.640
A0A2J6QFC3
HCP-like protein.
    
 0.640
A0A2J6QNP8
Uncharacterized protein.
    
 0.640
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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