STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6Q7S72-hydroxyhepta-2,4-diene-1,7-dioate isomerase. (277 aa)    
Predicted Functional Partners:
A0A2J6PJR7
Homogentisate 1,2-dioxygenase.
  
 
 0.600
A0A2J6Q9P5
Homogentisate 1,2-dioxygenase-like protein.
  
 
 0.600
A0A2J6QKI1
Homogentisate 1,2-dioxygenase.
  
 
 0.600
A0A2J6QP18
Homogentisate 1,2-dioxygenase.
  
 
 0.600
A0A2J6PW00
ALDH-like protein.
   
 0.595
A0A2J6QNH0
Mitochondrial putative fumarate hydratase.
   
 0.564
A0A2J6PGH5
3-isopropylmalate dehydratase.
  
 
  0.550
A0A2J6Q9Z2
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
  0.550
A0A2J6QNG9
Malate synthase; Belongs to the malate synthase family.
    
 0.519
A0A2J6Q059
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
  0.505
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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