STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6Q969Glycoside hydrolase family 3 protein. (922 aa)    
Predicted Functional Partners:
A0A2J6Q952
P53-like transcription factor.
 
    
 0.909
A0A2J6PNZ3
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.783
A0A2J6PVI2
Glycoside hydrolase family 20 protein.
     
 0.688
A0A2J6QE23
Carbohydrate-binding module family 1 protein; Belongs to the glycosyl hydrolase 18 family.
     
 0.681
A0A2J6Q377
Beta-hexosaminidase.
     
 0.680
A0A2J6QF26
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.628
A0A2J6QMS6
SH3 domain-containing protein.
    
 0.593
A0A2J6PLU7
Ras-domain-containing protein.
    
 0.556
A0A2J6QD02
Mannose 6-phosphate receptor domain-containing protein.
    
 
 0.548
A0A2J6PTE4
Carbohydrate-binding module family 1 protein; Belongs to the glycosyl hydrolase 18 family.
     
 0.519
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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