STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6Q9Y6Uncharacterized protein. (411 aa)    
Predicted Functional Partners:
A0A2J6QEK9
Uncharacterized protein.
  
 
   0.728
A0A2J6PHA1
Putative ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
    
   0.669
A0A2J6PHZ4
Uncharacterized protein.
    
   0.669
A0A2J6PI77
Uncharacterized protein.
    
   0.669
A0A2J6PIJ0
Uncharacterized protein.
    
   0.669
A0A2J6PJI4
Uncharacterized protein.
    
   0.669
A0A2J6PJL8
Ribosomal protein S16.
    
   0.669
A0A2J6PKW6
Translational machinery component.
    
   0.669
A0A2J6PLY4
Putative 37S ribosomal protein MRP2, mitochondrial.
    
   0.669
A0A2J6PPZ4
Uncharacterized protein.
    
   0.669
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.