STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6QAP5Protein YIP. (300 aa)    
Predicted Functional Partners:
A0A2J6QAB1
Protein YIP.
   
 
 0.963
A0A2J6QET1
Golgi apparatus membrane protein TVP23; Golgi membrane protein involved in vesicular trafficking. Belongs to the TVP23 family.
   
 
 0.896
A0A2J6QAR0
RanBD1 domain-containing protein.
 
    
 0.859
A0A2J6QA05
Protein YIP.
   
 
 0.663
A0A2J6QAM5
PAS domain-containing protein.
 
      0.571
A0A2J6Q2B9
Vps5-domain-containing protein.
    
  0.544
A0A2J6Q640
Putative AP-1 adaptor complex subunit MU; Belongs to the adaptor complexes medium subunit family.
     
 0.488
A0A2J6QAM4
DEAD/DEAH box helicase-like protein.
 
      0.485
A0A2J6Q0I3
PRA1 family protein.
      
 0.457
A0A2J6PTX1
Uncharacterized protein.
    
  0.440
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.