STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6QEU2Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (391 aa)    
Predicted Functional Partners:
A0A2J6PW06
Dihydroxy-acid dehydratase.
  
 0.910
A0A2J6Q754
Dihydroxy-acid dehydratase-like protein.
  
 0.883
A0A2J6QIQ6
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
 0.847
A0A2J6Q9M7
Homoserine dehydrogenase.
  
 
 0.842
A0A2J6PXQ0
2-oxoisovalerate dehydrogenase beta subunit mitochondrial.
   
 0.790
A0A2J6QLM8
Small subunit of acetolactate synthase.
  
 0.787
A0A2J6PLE9
Homoserine kinase.
  
 
 0.785
A0A2J6QE05
Threonine dehydratase.
  
 
 0.785
A0A2J6QMD3
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
  
 
 0.780
A0A2J6PGK9
Aldolase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.775
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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