STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6QEZ6Valyl-tRNA synthetase-like protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1104 aa)    
Predicted Functional Partners:
A0A2J6QPX2
40S ribosomal protein S3aE.
   
 0.970
A0A2J6PKZ1
Leucyl-tRNA synthetase.
   
 0.952
A0A2J6QR15
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
0.945
A0A2J6QEM7
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.942
A0A2J6PXG6
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.938
A0A2J6QDV8
Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.914
A0A2J6QDY6
Uncharacterized protein.
  
 0.914
A0A2J6QKH0
Brix-domain-containing protein.
 
 
  
 0.909
ALA1
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.888
A0A2J6Q5F3
TPR-like protein.
  
  
 0.877
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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