STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6QF85Uncharacterized protein. (910 aa)    
Predicted Functional Partners:
A0A2J6PSC3
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.837
A0A2J6Q444
Uncharacterized protein.
    
 
 0.835
A0A2J6Q580
TFIID-18kDa-domain-containing protein.
    
 
 0.834
A0A2J6PNP3
SGF29 C-terminal domain-containing protein.
    
 
 0.827
A0A2J6QNQ3
Uncharacterized protein.
    
 
 0.821
A0A2J6PRR9
TFIID_20kDa domain-containing protein.
    
 
 0.813
A0A2J6QNB5
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 
 0.813
A0A2J6Q1W0
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 
 0.727
A0A2J6PE16
Uncharacterized protein.
   
 
 0.697
A0A2J6PWS0
TFIID-31kDa-domain-containing protein.
   
 
 0.697
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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