STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6QHV0Amidase signature enzyme. (718 aa)    
Predicted Functional Partners:
A0A2J6PK30
Carboxyl transferase.
  
 0.976
A0A2J6PSS6
ClpP/crotonase.
  
 0.976
A0A2J6PL13
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
 
 0.974
A0A2J6PSP3
Uncharacterized protein.
 
 0.941
A0A2J6PIR6
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.924
A0A2J6PJJ3
3-methylcrotonyl-CoA carboxylase-like protein subunit alpha.
   
 0.918
A0A2J6PWD6
Putative acetyl-CoA carboxylase.
  
 0.914
A0A2J6QPK2
Urea carboxylase.
   
 0.902
A0A2J6PL23
Arginase; Belongs to the arginase family.
    
 0.899
A0A2J6Q2L7
Formamidase-like protein.
  
 
 0.868
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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