STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6QHY8RNA-dependent RNA polymerase. (1317 aa)    
Predicted Functional Partners:
A0A2J6PI15
RNA helicase.
      
 0.493
A0A2J6PDK2
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.491
A0A2J6PQG4
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.491
A0A2J6PT97
RNase3 domain-containing protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.491
A0A2J6QC39
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.491
A0A2J6QJ09
RNA helicase.
      
 0.489
A0A2J6QBK6
RNA helicase.
      
 0.485
A0A2J6PIK9
Ribonuclease III.
    
 
 0.484
A0A2J6QA08
Uncharacterized protein.
    
 
 0.480
A0A2J6Q332
Eukaryotic translation initiation factor-like protein 2C 2; Belongs to the argonaute family.
      
 0.461
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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