STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GUF1Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (655 aa)    
Predicted Functional Partners:
A0A2J6QM08
Uncharacterized protein.
  
 
 0.950
A0A2J6PND6
Putative 60S ribosomal protein L5.
   
 
 0.948
A0A2J6QPY5
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.945
A0A2J6QD46
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.942
A0A2J6Q719
Ribosomal protein S6.
   
 
 0.938
A0A2J6Q5W5
Mitochondrial ribosomal protein-like protein.
  
 
 0.920
A0A2J6QPY6
60S ribosomal protein l7.
    
 
 0.919
A0A2J6QMD2
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.918
A0A2J6PTV6
60S ribosomal protein L35.
    
 
 0.917
A0A2J6QMK7
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
  
 0.917
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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