STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6QNC4WD repeat-containing protein-like protein. (646 aa)    
Predicted Functional Partners:
A0A2J6PN96
DUF663-domain-containing protein.
   
 
 0.998
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.998
A0A2J6PJ48
U3 small nucleolar RNA-associated protein 22.
   
 
 0.997
A0A2J6Q578
Uncharacterized protein.
   
 
 0.997
A0A2J6Q5P0
Periodic tryptophan protein-like protein 2.
   
 
 0.997
A0A2J6QAW5
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.997
A0A2J6QI52
Utp21-domain-containing protein.
   
 
 0.997
A0A2J6QHN2
rRNA processing protein-like protein Bystin.
   
 
 0.996
A0A2J6QJY7
Nucleolar complex protein-like protein.
   
 
 0.996
A0A2J6QNB3
TRAUB-domain-containing protein.
   
 
 0.996
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.