STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6QPB8Putative 40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family. (130 aa)    
Predicted Functional Partners:
A0A2J6PF51
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.999
A0A2J6PF99
40S ribosomal protein S5A; Belongs to the universal ribosomal protein uS7 family.
  
 0.999
A0A2J6PK48
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 0.999
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
A0A2J6PRU8
40S ribosomal protein S27.
   
 0.999
A0A2J6PYG1
Ribosomal protein S17e.
   
 0.999
A0A2J6Q020
Ribosomal protein S28e.
   
 0.999
A0A2J6Q1Z1
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 0.999
A0A2J6Q222
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.999
A0A2J6Q2M5
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.