STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900086725_00283Unannotated protein. (428 aa)    
Predicted Functional Partners:
GCA_900086725_00284
Unannotated protein.
 
  
  0.955
GCA_900086725_02882
Unannotated protein.
 
  
  0.815
GCA_900086725_03696
Unannotated protein.
 
  
  0.793
GCA_900086725_03344
Unannotated protein.
 
  
  0.767
GCA_900086725_02809
Unannotated protein.
  
  
  0.742
GCA_900086725_01820
Unannotated protein.
  
     0.739
GCA_900086725_02300
Unannotated protein.
 
  
  0.729
GCA_900086725_00861
Unannotated protein.
 
  
  0.725
GCA_900086725_01288
Unannotated protein.
 
  
  0.722
GCA_900086725_02094
Unannotated protein.
     
 0.719
Your Current Organism:
Bariatricus massiliensis
NCBI taxonomy Id: 1745713
Other names: B. massiliensis, CSUR P2179, DSM 101783, Ruminococcus sp. AT12, strain AT12
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.