STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900086725_00771Unannotated protein. (268 aa)    
Predicted Functional Partners:
GCA_900086725_00773
Unannotated protein.
 
  
 0.970
GCA_900086725_00772
Unannotated protein.
 
    0.964
GCA_900086725_00677
Unannotated protein.
  
 
  0.830
GCA_900086725_02716
Unannotated protein.
  
  
  0.683
GCA_900086725_00100
Unannotated protein.
  
  
 0.669
GCA_900086725_02066
Unannotated protein.
  
  
 0.669
GCA_900086725_03468
Unannotated protein.
    
  0.619
GCA_900086725_02715
Unannotated protein.
  
  
  0.601
GCA_900086725_02717
Unannotated protein.
  
  
  0.582
GCA_900086725_03198
Unannotated protein.
  
 
  0.579
Your Current Organism:
Bariatricus massiliensis
NCBI taxonomy Id: 1745713
Other names: B. massiliensis, CSUR P2179, DSM 101783, Ruminococcus sp. AT12, strain AT12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.