STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900086725_02152Unannotated protein. (117 aa)    
Predicted Functional Partners:
GCA_900086725_02151
Unannotated protein.
  
  
 0.987
GCA_900086725_02153
Unannotated protein.
 
  
 0.912
GCA_900086725_02154
Unannotated protein.
       0.755
GCA_900086725_00986
Unannotated protein.
 
  
  0.621
GCA_900086725_00917
Unannotated protein.
 
  
  0.603
GCA_900086725_02387
Unannotated protein.
 
    0.588
GCA_900086725_00685
Unannotated protein.
   
 
  0.577
GCA_900086725_03118
Unannotated protein.
 
     0.564
GCA_900086725_02150
Unannotated protein.
       0.531
GCA_900086725_02304
Unannotated protein.
  
  
 0.523
Your Current Organism:
Bariatricus massiliensis
NCBI taxonomy Id: 1745713
Other names: B. massiliensis, CSUR P2179, DSM 101783, Ruminococcus sp. AT12, strain AT12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.