STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALT34448.1Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)    
Predicted Functional Partners:
ALT34447.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.994
ALT34446.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.987
ALT34716.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.864
ALT34712.1
Sn-glycerol-3-phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 
 0.849
ALT34421.1
Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.845
ALT34444.1
D-galactosyl-beta-1-3-N-acetyl-D-hexosamine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.809
ALT35987.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.793
ALT36070.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.790
ALT36268.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.776
ALT35592.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.772
Your Current Organism:
Cutibacterium acnes
NCBI taxonomy Id: 1747
Other names: ATCC 6919, Bacillus acnes, C. acnes, CIP 53.117, Corynebacterium acnes, DSM 16379, JCM 6425, LMG 16711, LMG:16711, NCTC 737, NRRL B-4224, Propionibacterium acnes, Propionicibacterium acnes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.