STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALT36330.1Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)    
Predicted Functional Partners:
ALT34459.1
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.856
ALT34460.1
Cobalamin biosynthesis protein CobN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.848
ALT34458.1
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.834
ALT34456.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.777
ALT34457.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.777
ALT34461.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.547
ALT36331.1
Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.547
Your Current Organism:
Cutibacterium acnes
NCBI taxonomy Id: 1747
Other names: ATCC 6919, Bacillus acnes, C. acnes, CIP 53.117, Corynebacterium acnes, DSM 16379, JCM 6425, LMG 16711, LMG:16711, NCTC 737, NRRL B-4224, Propionibacterium acnes, Propionicibacterium acnes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.