STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N5BAA4TFIIE domain-containing protein. (398 aa)    
Predicted Functional Partners:
A0A0N5B6F8
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
   
 0.999
A0A0N5C3A1
BSD domain-containing protein.
   
 0.998
A0A0N5C6D0
General transcription factor IIH subunit.
   
 0.998
A0A0N5CEE4
Uncharacterized protein.
   
 0.998
A0A0N5CF39
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.998
A0A0N5B2M8
Helicase ATP-binding domain-containing protein.
    
 0.997
A0A0N5BFL5
Uncharacterized protein.
   
 0.997
A0A0N5C845
MAT1 domain-containing protein.
    
 0.997
A0A0N5BQA6
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.996
A0A0N5BXC4
Uncharacterized protein.
    
 0.996
Your Current Organism:
Strongyloides papillosus
NCBI taxonomy Id: 174720
Other names: S. papillosus
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