STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tel_03320Carboxysome shell protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)    
Predicted Functional Partners:
Tel_03325
Carbon dioxide-concentrating protein CcmK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.955
Tel_03330
Carbon dioxide-concentrating protein CcmK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.945
Tel_03360
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.936
Tel_03305
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.906
Tel_03315
Carboxysome shell protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.847
Tel_03310
Carboxysome shell protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.831
Tel_01385
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.730
Tel_01390
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0753 family.
  
     0.701
Tel_03300
Ribulose 1,5-bisphosphate carboxylase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.663
Tel_03335
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
 
     0.616
Your Current Organism:
Tenderia electrophaga
NCBI taxonomy Id: 1748243
Other names: C. Tenderia electrophaga, Candidatus Tenderia electrophaga, Gammaproteobacteria bacterium NRL1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.