STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tel_04305Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa)    
Predicted Functional Partners:
Tel_11700
Cardiolipin synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.976
Tel_14100
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.976
Tel_01215
Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
     
 0.935
Tel_04300
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
Tel_15540
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.582
Tel_12825
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.520
Tel_01065
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.466
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
   
 0.432
Tel_09705
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.410
Tel_04310
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.405
Your Current Organism:
Tenderia electrophaga
NCBI taxonomy Id: 1748243
Other names: C. Tenderia electrophaga, Candidatus Tenderia electrophaga, Gammaproteobacteria bacterium NRL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.