STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tel_06100Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (782 aa)    
Predicted Functional Partners:
Tel_06105
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.952
Tel_06090
DEAD/DEAH box helicase; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.776
Tel_06095
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.775
Tel_02405
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.733
Tel_06110
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.634
Tel_06120
DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.634
Tel_06115
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.631
Tel_06125
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.631
Tel_04625
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.476
Tel_06085
Cell filamentation protein Fic; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.435
Your Current Organism:
Tenderia electrophaga
NCBI taxonomy Id: 1748243
Other names: C. Tenderia electrophaga, Candidatus Tenderia electrophaga, Gammaproteobacteria bacterium NRL1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.