STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tel_06605Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)    
Predicted Functional Partners:
Tel_14540
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.
 
 
 0.915
Tel_11355
Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.702
Tel_01115
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.591
Tel_06600
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.590
Tel_11360
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.573
Tel_13025
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.573
Tel_06595
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.557
dnaA
Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.501
Tel_06590
Polyphosphate kinase 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.498
Tel_10075
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.479
Your Current Organism:
Tenderia electrophaga
NCBI taxonomy Id: 1748243
Other names: C. Tenderia electrophaga, Candidatus Tenderia electrophaga, Gammaproteobacteria bacterium NRL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.