STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tel_10330RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (772 aa)    
Predicted Functional Partners:
Tel_10325
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.969
Tel_10320
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.938
Tel_02730
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.817
Tel_11600
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.795
Tel_10150
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
Tel_02740
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.493
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
       0.471
Tel_11605
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.466
Your Current Organism:
Tenderia electrophaga
NCBI taxonomy Id: 1748243
Other names: C. Tenderia electrophaga, Candidatus Tenderia electrophaga, Gammaproteobacteria bacterium NRL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.