STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tel_11895Copper resistance protein CopA; Derived by automated computational analysis using gene prediction method: Protein Homology. (583 aa)    
Predicted Functional Partners:
Tel_11890
Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.969
Tel_03445
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.921
Tel_11905
Hypothetical protein; Member of a two-component regulatory system.
 
 
 0.666
Tel_11850
Copper-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.579
Tel_11900
Response regulator in two-component regulatory system with CusS; regulates the copper efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.558
Tel_01340
Methylamine utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.538
Tel_08920
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.505
Tel_07445
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.501
tatC
Twin-arginine protein translocation system subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
    
 
 0.490
Tel_11875
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.488
Your Current Organism:
Tenderia electrophaga
NCBI taxonomy Id: 1748243
Other names: C. Tenderia electrophaga, Candidatus Tenderia electrophaga, Gammaproteobacteria bacterium NRL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.