STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tel_13030Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (849 aa)    
Predicted Functional Partners:
Tel_13025
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.820
Tel_13555
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.657
Tel_13035
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.586
Tel_13040
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.586
Tel_13550
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.580
Tel_13470
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.562
Tel_13045
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.519
Tel_13515
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.480
dnaG
Hypothetical protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
     
 0.437
xerC
Recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
     
 0.408
Your Current Organism:
Tenderia electrophaga
NCBI taxonomy Id: 1748243
Other names: C. Tenderia electrophaga, Candidatus Tenderia electrophaga, Gammaproteobacteria bacterium NRL1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.