STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASN18_0181Hypothetical protein. (71 aa)    
Predicted Functional Partners:
ASN18_0180
Hypothetical protein.
       0.789
ASN18_0179
Putative carbamoyl transferase, NodU family.
       0.532
ASN18_0460
XRE family transcriptional regulator.
  
     0.507
ASN18_0178
Hypothetical protein.
       0.448
ASN18_0177
Hypothetical protein.
       0.435
ASN18_0003
Hypothetical protein.
 
     0.430
Your Current Organism:
Nitrospirae bacterium HCH1
NCBI taxonomy Id: 1748249
Other names: N. bacterium HCH-1, Nitrospirae bacterium HCH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.