STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASN18_0774Two-component system sensor histidine kinase. (415 aa)    
Predicted Functional Partners:
ASN18_1683
Histidine kinase.
 
 
0.915
ASN18_0775
Sigma-54-dependent Fis family transcriptional regulator.
 
 
  0.914
ASN18_2127
Multi-sensor hybrid histidine kinase.
 
 
0.892
ASN18_3091
Two-component system sensor histidine kinase.
 
 
0.891
ASN18_1954
Histidine kinase.
 
  0.886
ASN18_2203
Esponse regulator with CheY-like receiver.
 
 
  0.878
ASN18_1800
Hybrid sensor histidine kinase/response regulator.
 
 
0.875
ASN18_0652
Histidine kinase.
   
0.869
ASN18_0655
Multi-sensor signal transduction histidine kinase.
 
 
0.868
ASN18_2858
Multi-sensor signal transduction histidine kinase.
 
 
0.868
Your Current Organism:
Nitrospirae bacterium HCH1
NCBI taxonomy Id: 1748249
Other names: N. bacterium HCH-1, Nitrospirae bacterium HCH-1
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