STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUM43358.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (282 aa)    
Predicted Functional Partners:
KUM44692.1
Cyclic beta 1-2 glucan synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.777
KUM42864.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.773
KUM42865.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
0.773
KUM42998.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.773
KUM41303.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.773
KUM43996.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.773
KUM43719.1
Prepilin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.438
KUM44679.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.434
KUM43199.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.430
KUM42928.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.417
Your Current Organism:
Pseudomonas sp. EpSL25
NCBI taxonomy Id: 1749078
Other names: P. sp. EpS/L25, Pseudomonas sp. EpS/L25
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.