STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900155425_01047Unannotated protein. (438 aa)    
Predicted Functional Partners:
GCA_900155425_01045
Unannotated protein.
 
   
 0.940
GCA_900155425_01048
Unannotated protein.
 
     0.929
GCA_900155425_01049
Unannotated protein.
 
     0.889
GCA_900155425_01050
Unannotated protein.
       0.781
GCA_900155425_01046
Unannotated protein.
     
 0.755
GCA_900155425_00274
Unannotated protein.
  
  
  0.718
GCA_900155425_00817
Unannotated protein.
 
 
 0.682
GCA_900155425_02108
Unannotated protein.
  
     0.647
GCA_900155425_03876
Unannotated protein.
  
     0.626
GCA_900155425_03770
Unannotated protein.
  
     0.622
Your Current Organism:
Parabacteroides massiliensis
NCBI taxonomy Id: 1750560
Other names: CSUR P2231, DSM 101860, Parabacteroides sp. SN4, strain Marseille-P2231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.