STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV50141.1Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)    
Predicted Functional Partners:
ALV54388.1
Ribosome-associated protein IOJAP; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.895
ALV50143.1
Nicotinate-nicotinamide nucleotide adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.798
ALV50142.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.783
ALV50144.1
Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.593
ALV50140.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
ALV53517.1
precorrin-3B C17-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.530
ALV49513.1
Cobalamin biosynthesis protein CobQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.486
ALV49521.1
Precorrin methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.446
ALV49270.1
Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.430
ALV49820.1
Cobalamin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.428
Your Current Organism:
Streptomyces sp. 4F
NCBI taxonomy Id: 1751294
Other names: S. sp. 4F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.